Insertion junction: CLIP2.059461_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059461
Chromosome:chromosome 12
Location:2611763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506200 HTB18 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGAGTTGTTGAAATAGGTGGTAAACGTAAAAGAGTACTGAATTATTA
Internal bar code:ACTGCGAGAGATCGATGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4485
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTGAAAGGTGGTGTTG
Suggested primer 2:CGACGATGAGATGGGAGTGG