Insertion junction: CLIP2.059464_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059464
Chromosome:chromosome 5
Location:945622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGTCGGGCGACCCTACCGAGCCCTCTAATTATCGCCCCATCACGCTG
Internal bar code:GGGTTGTGTGATAGATCCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5319
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGACACCCACGTAAGAAA
Suggested primer 2:GCACAACCTGTTTCACCGAC