Insertion junction: CLIP2.059465_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059465
Chromosome:chromosome 16
Location:4583127
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g671150 (1 of 1) PTHR12770//PTHR12770:SF22 - FAMILY NOT NAMED // UPF0420 PROTEIN C16ORF58 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGATGCGGGGGCAGGGAGTGGGGGAAGCGGCCGGGGGGCGTGGCCGT
Internal bar code:CTTGGCCTTAGAAGTGTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGACGCCCCCTCTCATTT
Suggested primer 2:GTGATGCCGTGTGGTGTAGA