Insertion junction: CLIP2.059474_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059474
Chromosome:chromosome 10
Location:3893826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446400 VPS4,KATL1,KAT3,KAT2 (1 of 1) PTHR23074//PTHR23074:SF78 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2; Katanin like protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTAGAGGAGAGAACCCCCGGTGAAACGGAAGCAAGTCCTGCTAGCCC
Internal bar code:CTCAGAGATTCACTCCAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3024
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGCCTGGATGGTCCCT
Suggested primer 2:CGAAACTGGAGTTGGACGGA