Insertion junction: CLIP2.059479_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059479
Chromosome:chromosome 16
Location:7855377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATTTCTCTGAACTGGGTGGTGGGTGCGGCCCTACCTGAGGGACTGTG
Internal bar code:AGTCCAAGTGACTCACCGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:61.9565
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGGCCAAGTCTTACAGC
Suggested primer 2:CCGGGCAAGTAGAGTTCGTT