Insertion junction: CLIP2.059486_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059486
Chromosome:chromosome 3
Location:4610307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176750 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAACATGAATGTAAATAGTAACGGCTGCGACGGGCTGCGGCATGGGC
Internal bar code:GATTTTTCATTATAGGTAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3142
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATTCGGCTGGTTCTCCA
Suggested primer 2:TACACGACCTGAACCCTTGC