Insertion junction: CLIP2.059492_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059492
Chromosome:chromosome 7
Location:6042185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800867 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAAGCAATGTCATTCCAATCACTGCGCCACAGTGCCTTGCCATGTCC
Internal bar code:CGAGTCTGAAGTAAGGTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3282
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTACATGCTGTGGGTGA
Suggested primer 2:GCAAGACCTACAAGCCCCAT