Insertion junction: CLIP2.059492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059492
Chromosome:chromosome 7
Location:6042207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800867 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCCTATCAGTCCGCATATGACATGTGATCCTCGGACCAGAGTGCCG
Internal bar code:CGAGTCTGAAGTAAGGTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3060
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGACCTACAAGCCCCAT
Suggested primer 2:CTGCTACATGCTGTGGGTGA