Insertion junction: CLIP2.059499_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059499
Chromosome:chromosome 14
Location:596354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611800 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACACTTGTGCTTTGCAACATCGTGCGCTGGTGGGGTGTTGGCGTTC
Internal bar code:TGGCTACCTTAAGGGTATACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCTGCACGGACTATCCC
Suggested primer 2:TGGCCTGTCGTAGTGTTTCC