Insertion junction: CLIP2.059500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059500
Chromosome:chromosome 10
Location:3874940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446250 (1 of 1) K13339 - peroxin-6 (PEX6, PXAAA1) 3'UTR
Cre10.g446275 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGATCTATAAAGTGTGGCATACGGTGCATGACAATACTGGCACAAAC
Internal bar code:TCGATACTAAATTTAGCTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:966
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGTGTGGAGGTCTGAC
Suggested primer 2:GTTGAAACCAGGCCAAGCAG