Insertion junction: CLIP2.059509_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059509
Chromosome:chromosome 17
Location:913830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702750 SDR27 (1 of 1) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase; Short-chain dehydrogenase/reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCGCAAGGCGCACGTCATGCTATTCTTACACACCCTCCGTCATCCT
Internal bar code:TCGGAGCATCATCGCATTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:237
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGCAGTGTGTGTGTTT
Suggested primer 2:AACGCGCGGATCCTGATTAT