Insertion junction: CLIP2.059514_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059514
Chromosome:chromosome 17
Location:5543767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739500 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR
Cre17.g739550 CPLD12 Conserved in the Plant Lineage and Diatoms; (1 of 11) 2.7.4.3 - Adenylate kinase / Myokinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGACCCGAGCAAACCCGGAAATGCGCCACAGCACCCCTCCGGCAGTCC
Internal bar code:AGTTTGGTATTTCAAAACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAGCTTGCTAGGGAACG
Suggested primer 2:CGGCATACAGCTGTTCAACG