Insertion junction: CLIP2.059516_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059516
Chromosome:chromosome 12
Location:4063467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516500 CUL4,CUL2 (1 of 1) K10609 - cullin 4 (CUL4); Ubiquitin ligase SCF complex subunit Cullin 3'UTR
Cre12.g516550 GTR16,BMT1 (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase; putative Beta-1%252C4-mannosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACAGCTGGTGAGACGGAAAGTAGAACAACAGCTAGCATGTCGTCAGG
Internal bar code:GGTTATGGTGGCGAGGCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3070
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATTGAGAGCCTCATTG
Suggested primer 2:GTAGCCGTAGTTGTGCCAGT