Insertion junction: CLIP2.059524_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059524
Chromosome:chromosome 11
Location:2155413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467739 IFT54,Traf3ip1,FAP116,Dyf-11Elipsa Intraflagellar Transport Protein 54; (1 of 1) PTHR31363:SF0 - TRAF3-INTERACTING PROTEIN 1 3'UTR
Cre11.g467740 (1 of 1) PTHR10108//PTHR10108:SF705 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGATTGGTAAATACGGCTGGCCATGTCCACCATCACTACCGCATTCC
Internal bar code:GTTGTCGGATTATGTGACAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCAGATCGCGCTGTAC
Suggested primer 2:TGAGCTTGGGTCGACAGAAC