Insertion junction: CLIP2.059526_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059526
Chromosome:chromosome 3
Location:5500241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184750 (1 of 1) PF08524 - rRNA processing (rRNA_processing) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTTGCCCCCGACCCCTCGCGCGGCCTCACTTTAACCACCCTTCTCAA
Internal bar code:ATAACACGTGATGTGAACCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:2.43902
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGAGGAAGAGGAGGAG
Suggested primer 2:AGGTACATGATGGTGTGGCG