Insertion junction: CLIP2.059530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059530
Chromosome:chromosome 16
Location:2822181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801920 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGGAGCGATACCCTTGGGCAAAATTATCAGTTATGCCATGCCACAGC
Internal bar code:CGGACACGTGAGGTGTATACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4969
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGAGGGATTGGGTTGC
Suggested primer 2:TCTTCTTTTGCCGGCAAAGC