Insertion junction: CLIP2.059544_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059544
Chromosome:chromosome 16
Location:4949362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686500 (1 of 1) PF03767 - HAD superfamily, subfamily IIIB (Acid phosphatase) (Acid_phosphat_B) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAAACTAATGTTACAGCCTCTTCTGGTACCGCATTCGTCTGTAATCG
Internal bar code:GGCTTTCTAGGGGCTACGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1894
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTTGGGCATGTGTTGT
Suggested primer 2:GACTGTGACGGGCAAAGGTA