Insertion junction: CLIP2.059548_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059548
Chromosome:chromosome 7
Location:1998027
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g325760 MAW10 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; Membrane-associated hydroxyproline-rich glycoprotein 10 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAGGCAGGTTGGATATGTTTCAGCAGGGTGGATATTTTCAGCGTTCA
Internal bar code:GCCTATTATTGCTTAATTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGTTCCTCATCCCCCG
Suggested primer 2:TCGTCATCGTCTTCAGCACC