Insertion junction: CLIP2.059549_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059549
Chromosome:chromosome 17
Location:1625899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTTCTCTCGTGGTGGGCGCAGCGCAGAAGGGGCAGGGGCCGCTTCCG
Internal bar code:ACTATTTACGTGATCATGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCACGCACTTACTTGG
Suggested primer 2:CTGATGCGCACATGTACGTG