Insertion junction: CLIP2.059560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059560
Chromosome:chromosome 1
Location:7604656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053288 (1 of 1) K01974 - RNA 3'-terminal phosphate cyclase (ATP) (RTCA, rtcA) 5'UTR
Cre01.g053300 AIH1 Agmatine iminohydrolase; (1 of 2) 3.5.3.12 - Agmatine deiminase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATGCCACCAGGCGTGAAGATGATTGACGGTGCGTATCAGGGACGAAT
Internal bar code:AGAAACGGTACTTACGTGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTGAGGTCAGGTGCTG
Suggested primer 2:AAGAGTCAGATTGGGCCAGC