Insertion junction: CLIP2.059561_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059561
Chromosome:chromosome 2
Location:1428514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083450 (1 of 1) IPR000104//IPR002938 - Antifreeze protein, type I // FAD-binding domain 3'UTR
Cre02.g083500 FAO2 (1 of 5) 1.14.13.114 - 6-hydroxynicotinate 3-monooxygenase / HNA-3-monooxygenase; FAD-dependent oxidoreductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGCATCTGTCGCAGAGTCGCAGATAGGCCATACATAGCCGTGTCCAC
Internal bar code:ATGTGGGCTTCGTTTTGAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1557
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGGTGCTGGAAGTGAG
Suggested primer 2:CAGCAGAGCACATCATTCGC