Insertion junction: CLIP2.059563_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059563
Chromosome:chromosome 7
Location:4892125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346500 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAACGCTCACATTCGTGGATATGTCCCGCGTGTCGACACCTGAACAC
Internal bar code:GAACGGATCCCCAGTGAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3334
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCATCTATCAGCGGTGG
Suggested primer 2:GCTGCTCTTCCCTGCTTACA