Insertion junction: CLIP2.059566_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059566
Chromosome:chromosome 3
Location:4976510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179350 MFT16 Major facilitator superfamily transporter; (1 of 1) PF03825//PF07690 - Nucleoside H+ symporter (Nuc_H_symport) // Major Facilitator Superfamily (MFS_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGAGAGACTGTAGGGCACAGGTGGCGTGTCAGCGGCGTGGCGTGGCG
Internal bar code:TCTTTATGCTCGGCTGCTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCAGGTCAAAGGAGCAA
Suggested primer 2:GTAGGGTGTGACGGTGGAAG