Insertion junction: CLIP2.059576_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059576
Chromosome:chromosome 7
Location:6145544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355900 3'UTR
Cre07.g355950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTGTGCCCTTGGATGGGCACGGATCACACATGTTAGGTATTGCCTA
Internal bar code:TTTAGAAGGAGAGTCGAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3598
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGCGGTTTCATAGTTCG
Suggested primer 2:CTATGAGGAGAAGGCTGCGG