Insertion junction: CLIP2.059582_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059582
Chromosome:chromosome 13
Location:2132893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577500 VTI1 (1 of 1) K08493 - vesicle transport through interaction with t-SNAREs 1 (VTI1); Endosomal Qb-SNARE, Vti1-family (Qb.III.b) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGTGCCTGACGACGGGGGCACCTGGAAGGCTAGGCGCGGGTGCGGG
Internal bar code:GTAAAGTTCGGTCCTGAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2411
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCGGAACATCAGGGAT
Suggested primer 2:CCACTACCGGTAACCAACCC