Insertion junction: CLIP2.059587_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059587
Chromosome:chromosome 10
Location:6693882
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466550 TF2H1 General transcription factor IIH subunit 1; (1 of 1) IPR005607//IPR027079 - BSD domain // TFIIH subunit Tfb1/p62 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCACCCTCTGCCTCACCCGCAGCCTCCTCCTCCGCCAGCGCTCGGGC
Internal bar code:CATTCCGATGCAAAGCCTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACAACCACAACCACCAT
Suggested primer 2:CGCACACACACACACATCTC