Insertion junction: CLIP2.059595_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059595
Chromosome:chromosome 17
Location:281553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCCTAGTCAATGTCCCGTGATGGCTCCCCATTCCTCGGTCAATTCC
Internal bar code:CAATGCACAGGATATCGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4001
LEAP-Seq percent confirming:65.1163
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACGCAGAGTTGTCAGG
Suggested primer 2:GCGTAGAGGACCGTTCTAGC