Insertion junction: CLIP2.059595_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059595
Chromosome:chromosome 17
Location:281563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTCAACATGAAACACATTACATTCTGCCGTCGGCACACAACAAATGG
Internal bar code:CAATGCACAGGATATCGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2198
LEAP-Seq percent confirming:18.5185
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGAGGACCGTTCTAGC
Suggested primer 2:AGTCACGCAGAGTTGTCAGG