Insertion junction: CLIP2.059607_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059607
Chromosome:chromosome 10
Location:5478687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTCGCTGTATCAATCATACAACGCAGCCAAAACTGGGTGCTCTCTTC
Internal bar code:CGGAAGCAATGGAATCAGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCATGCCCACATCAGTG
Suggested primer 2:CTGCACGATGTTGGAGTCCT