Insertion junction: CLIP2.059615_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059615
Chromosome:chromosome 2
Location:565826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076950 SUB4 (1 of 1) 3.4.21.62//3.4.24.3 - Subtilisin // Microbial collagenase / Collagenase I; Subtilisin-like protease outside_mRNA
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTTTTGAGACTAGTTTTGGCGGTCCATGAGCTTCCTGGCTCGTTTGG
Internal bar code:GTATTAGCATGCGGATCTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCGACAGTTCCGTCTG
Suggested primer 2:TGTGAACGAGTCTGACAGGC