Insertion junction: CLIP2.059622_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059622
Chromosome:chromosome 2
Location:4179500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104100 (1 of 1) PTHR10209//PTHR10209:SF216 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCCTTCGGTTCGCCGCCTTTCACATGATGCCTCCTAGCCCACCATG
Internal bar code:GGTTGTTCCAGTTTAATCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3919
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATCGCACGTGATCTTC
Suggested primer 2:AGCAATCGAAATCCAGGCCA