Insertion junction: CLIP2.059625_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059625
Chromosome:chromosome 16
Location:7580985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684043 ALDH24,ALDH24A1 (1 of 1) 1.2.1.47 - 4-trimethylammoniobutyraldehyde dehydrogenase; Aldehyde dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGTGGCGGGCTGACAGGAGCGGTTTGGTCGTGGACGTGCAACAAGC
Internal bar code:TGGGGGCCGTAAGTGATCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCCTGCCTAGACCTCT
Suggested primer 2:TAGACCTGCTCCACCATCGA