Insertion junction: CLIP2.059625_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059625
Chromosome:chromosome 16
Location:7580986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684043 ALDH24,ALDH24A1 (1 of 1) 1.2.1.47 - 4-trimethylammoniobutyraldehyde dehydrogenase; Aldehyde dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGATGTTACAGAGGGGACAGTGCCAGCACCCGAAGACGCCGAGCCA
Internal bar code:TGGGGGCCGTAAGTGATCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACCTGCTCCACCATCGA
Suggested primer 2:TCATGCCTGCCTAGACCTCT