Insertion junction: CLIP2.059627_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059627
Chromosome:chromosome 3
Location:6169808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191050 RAN1 Ran-like small GTPase; (1 of 1) K07936 - GTP-binding nuclear protein Ran (RAN) 3'UTR
Cre03.g191100 (1 of 1) PF15016 - Domain of unknown function (DUF4520) (DUF4520) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAATACTGTACTTTGTGTGACCTCCTGCCTGCTCGTCATTCGTGTGA
Internal bar code:ATTAAAACTTAGAAGGCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4861
LEAP-Seq percent confirming:99.4152
LEAP-Seq n confirming:170
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:171

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGCGATAGGTCAGTAG
Suggested primer 2:GCAGGACGATGTTGGGATGA