Insertion junction: CLIP2.059628_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059628
Chromosome:chromosome 2
Location:4256000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104650 (1 of 1) K14573 - nucleolar protein 4 (NOP4, RBM28) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCCAGCCGACTGTTACATACCGTGACTCGCTGCCAGCCTGCCACGC
Internal bar code:AGCTTTGGTTATTCCCCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2132
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGATTATGCCGTCGGTT
Suggested primer 2:GTTCTATGTCGTCCAGGGCC