Insertion junction: CLIP2.059629_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059629
Chromosome:chromosome 1
Location:5009966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034750 intron
Cre01.g034800 (1 of 1) PTHR21477//PTHR21477:SF12 - FAMILY NOT NAMED // CF9 PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGTAAGATTTACTTTCTGCACGACCCAGATCATAGCGCTGAAGGAG
Internal bar code:TATAAGTTCATGTGGTCATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGGCGGCAAACAATAA
Suggested primer 2:GGAAAGGAGCTGAGGGCAAT