Insertion junction: CLIP2.059631_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059631
Chromosome:chromosome 10
Location:6651027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466250 PRP20 (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36); Putative Utp21 subunit of U3 snoRNP 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACACCACCCGCAGCGCCAACCGCTGTGTTGCTCCGTACACGGCCGCCC
Internal bar code:GGATTTGTTGTGTAAGCCAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTCACAGTGCCGCATA
Suggested primer 2:CGTCACACAAACGTGCATGT