Insertion junction: CLIP2.059632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059632
Chromosome:chromosome 6
Location:4763676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCCAACCGGCCACGTCCGGATTTGCGGGGATGCCAAAGGCCCCCAA
Internal bar code:GCGGGGTGGAGCATTCTTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3785
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGTGTCAAGGGCTTGC
Suggested primer 2:ATGTGATGCAATGCGCGTAC