Insertion junction: CLIP2.059641_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059641
Chromosome:chromosome 2
Location:840972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078831 (1 of 1) IPR002059//IPR012340 - Cold-shock protein, DNA-binding // Nucleic acid-binding, OB-fold 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTAAGACACGATGTAGTTAACGGCGCCCTGCTCGTGCTCACTCATGA
Internal bar code:GCTTAGCTAAAACACAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAATAGATGACGGCGCA
Suggested primer 2:CAGGCCCCCTTCACCTAAAG