Insertion junction: CLIP2.059649_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059649
Chromosome:chromosome 17
Location:1613275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707500 TOC120,TOC159 Translocon at the outer envelope membrane of chloroplasts, receptor subunit; (1 of 1) PF11886 - Translocase of chloroplast 159/132, membrane anchor domain (TOC159_MAD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTAGGGGTTAACGGGTACGGCTGCTTGTATGCTGGCTTTGTTGTTGC
Internal bar code:GGCAAGTGAAAGTTTGGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2615
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGAAGTTATGTTGGCGC
Suggested primer 2:ATGCTGGGGCTAAGGACAAC