Insertion junction: CLIP2.059652_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059652
Chromosome:chromosome 6
Location:7300031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAAGATTTACGTAGGTCTAGATAGGCGGCTGCAGGACAGCAGGGAT
Internal bar code:CATTAGCATTTGGCAGGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTACCTGCACCTTCCAC
Suggested primer 2:CAGGGCGTCTGAATTGCATG