Insertion junction: CLIP2.059656_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059656
Chromosome:chromosome 2
Location:2006249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088350 SNR3 (1 of 6) PF09335 - SNARE associated Golgi protein (SNARE_assoc); SNARE associated Golgi protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTATGGTGCCGGAGGCAGGGCACCTACTTCATGTGTGTGTGTGGCTTC
Internal bar code:AGGGTTTATGACTGGATGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3123
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTCCGAGAGCAACCTTG
Suggested primer 2:CTGCATTCACTCCGCATTCG