Insertion junction: CLIP2.059657_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059657
Chromosome:chromosome 4
Location:3294788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226900 (1 of 1) PTHR15441:SF1 - RIBONUCLEASE P PROTEIN SUBUNIT P14 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATGACCCTCAACCTAACTTTACTGGACACTCGAGAACTGCCAAAGC
Internal bar code:CGGTCTTGGCGACTATCTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2454
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGAGTTCAGGAGGAGT
Suggested primer 2:CTCACACACCCAGGATCACC