Insertion junction: CLIP2.059658_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059658
Chromosome:chromosome 6
Location:7124703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297950 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGGGGAAGCCCTTTAGCTTAACGTTCTTCGCATGACATGCGGTAGAA
Internal bar code:ACTGCCGTATCATTAGTCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTAGGCGCCAAGGATAG
Suggested primer 2:ATATCGAACTCGGGCAGCAG