Insertion junction: CLIP2.059663_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059663
Chromosome:chromosome 3
Location:8808991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCGCAACAGTGTACAGCTTGTCACCACATGAAGCACGCAAGAATAAA
Internal bar code:TCTCCCACTTGCATAGGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1875
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCGTTCTGCATTGTAT
Suggested primer 2:GCGAGTAGCCCAGATCAGAC