Insertion junction: CLIP2.059663_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059663
Chromosome:chromosome 3
Location:8808995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGGGCGGATTACAACAAGAGGGTGAAATGTATGCGGGAAGCGTAGT
Internal bar code:TCTCCCACTTGCATAGGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTAGCCCAGATCAGAC
Suggested primer 2:TGCCCCGTTCTGCATTGTAT