Insertion junction: CLIP2.059666_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059666
Chromosome:chromosome 1
Location:3481073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACACGGACCGCCCCTCACGCAGGATGACGTGATAGCATTACCACACAT
Internal bar code:GTGGCGACTGAGTGCTCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5463
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCATGCATGTCTAGC
Suggested primer 2:ATGCCCTCCTACTCCGAACT