Insertion junction: CLIP2.059667_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059667
Chromosome:chromosome 13
Location:4594529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGAAGGCGGCATAAGACATGGACTTGGCCAGAAGCAACCAAACCCA
Internal bar code:TGGCACGGATAGCGTGAGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4041
LEAP-Seq percent confirming:99.1453
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACACAAGGCGGTTTTG
Suggested primer 2:CTGTTTGGGCCCGCTACTAA