Insertion junction: CLIP2.059678_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059678
Chromosome:chromosome 2
Location:1600615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085050 COP1,PCOP1 Plant-type constitutive photomorphogenesis protein 1; (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCAGAAGTGGCAAAGTGAAGTCACTAATACATCTTATGCTATGATGT
Internal bar code:AACAATCTCTTTTGGTAATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2105
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCTGTGAATGTGTTGG
Suggested primer 2:CCCCTGTGCAGCTGTCATAA