Insertion junction: CLIP2.059679_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059679
Chromosome:chromosome 6
Location:2248515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266900 LPA1L Low PSII Accumulation 1 homolog; (1 of 2) PF11998 - Protein of unknown function (DUF3493) (DUF3493) 5'UTR
Cre06.g266950 (1 of 9) PTHR10071 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTGACAGCACTATGATTATATACATATATGACAGCTGCATCACAAGA
Internal bar code:TGCGGGAACTATTAGAACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTGATGCACTGGTACC
Suggested primer 2:TTGTGGTATCAGGCGCAAGT